MLOC_5100 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.152713.397413.874411.7275
LEAShoots from the seedlings (10 cm shoot stage)23.954721.161117.639316.7956
INF1Young developing inflorescences (5mm)6.522026.35898.900364.98867
INF2Developing inflorescences (1-1.5 cm)9.549519.1069312.74529.49424
ROORoots from the seedlings (10 cm shoot stage)9.9084417.480213.87417.2023
NODDeveloping tillers at six leaf stage, 3rd internode15.774716.922222.08957.8425
CAR5Developing grain, bracts removed (5 DPA)9.021618.272618.927717.25826
CAR15Developing grain, bracts removed (15 DPA)4.64663.516654.99728.11566



CDS Structure of MLOC_5100






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251786.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251786.1CUST_19067_PI427708080NoneNoneNone
MLOC_24479.1NoneAvailableNonecontig_1645752 (Not mapped)
MLOC_5100.2NoneAvailableAvailablecontig_135884 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----