- Predicted Gene MLOC_50974
MLOC_50974 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 19.9197 | 18.4623 | 19.7113 | 20.1333 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.0017 | 14.7154 | 17.1669 | 12.2368 |
| INF1 | Young developing inflorescences (5mm) | 2.23674 | 1.69558 | 1.45225 | 1.66495 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.39304 | 1.66033 | 1.92567 | 2.01642 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 30.5671 | 30.3391 | 25.6323 | 35.7719 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 14.83 | 14.8794 | 22.7495 | 49.5874 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 28.4136 | 31.8577 | 29.5213 | 33.2899 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.1537 | 5.34151 | 5.1735 | 14.2966 |
CDS Structure of MLOC_50974
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50974.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g06710.1 |
-3 |
0.0 |
638 |
326/415 (79%) |
13105.m00724 protein GDSL-like lipase/acylhydrolase, putative, expressed |
| TAIR PP10 |
AT1G56670.1 |
-3 |
8e-98 |
309 |
160/325 (49%) |
GDSL-like Lipase/Acylhydrolase superfamily protein | chr1:21241688-21243965 FORWARD LENGTH=373 |
