- Predicted Gene MLOC_50973
MLOC_50973 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_50973_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_50973_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 106.224 | 86.9932 | 102.732 | 92.3264 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 78.3895 | 61.8489 | 57.214 | 54.0255 |
INF1 | Young developing inflorescences (5mm) | 45.6394 | 50.4558 | 54.2908 | 40.4861 |
INF2 | Developing inflorescences (1-1.5 cm) | 36.4537 | 36.6657 | 39.443 | 41 |
ROO | Roots from the seedlings (10 cm shoot stage) | 83.2823 | 109.367 | 105.236 | 120.838 |
NOD | Developing tillers at six leaf stage, 3rd internode | 145.972 | 84.2474 | 46.1972 | 248.187 |
CAR5 | Developing grain, bracts removed (5 DPA) | 79.6936 | 85.0428 | 83.2342 | 81.8301 |
CAR15 | Developing grain, bracts removed (15 DPA) | 43.1481 | 43.2902 | 40.8297 | 97.7689 |
CDS Structure of MLOC_50973
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50973.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g06700.2 |
+2 |
3e-119 |
348 |
168/186 (90%) |
13105.m00722 protein expressed protein |
TAIR PP10 |
AT1G09330.1 |
+2 |
2e-91 |
276 |
137/180 (76%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF846, eukaryotic (InterPro:IPR008564); Has 518 Blast hits to 518 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi - 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). | chr1:3013003-3014903 REVERSE LENGTH=186 |