MLOC_50953 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains151.067168.239160.293141.486
LEAShoots from the seedlings (10 cm shoot stage)77.123870.738460.192751.9521
INF1Young developing inflorescences (5mm)66.374674.700170.757552.4379
INF2Developing inflorescences (1-1.5 cm)57.206560.004759.201857.2643
ROORoots from the seedlings (10 cm shoot stage)157.522184.389138.983174.249
NODDeveloping tillers at six leaf stage, 3rd internode82.859966.62276.6424191.39
CAR5Developing grain, bracts removed (5 DPA)115.866112.255125.37499.7821
CAR15Developing grain, bracts removed (15 DPA)29.383325.250430.203955.8098



CDS Structure of MLOC_50953






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_50953.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362793NoneNoneNoneNone
MLOC_50953.3CUST_2787_PI427708080AvailableAvailablecontig_367934 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g08840.2 +2 0.0 614 334/387 (86%) 13108.m00927 protein phosphate/phosphate translocator, putative, expressed
TAIR PP10 AT1G61800.1 +2 0.0 521 261/299 (87%) | Symbols: GPT2, ATGPT2 | glucose-6-phosphate/phosphate translocator 2 | chr1:22824527-22826459 FORWARD LENGTH=388