- Predicted Gene MLOC_50927
MLOC_50927 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.1112 | 1.98881 | 2.18851 | 2.69933 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.54293 | 1.27647 | 1.58422 | 1.58404 |
| INF1 | Young developing inflorescences (5mm) | 0.0784021 | 0 | 0 | 0.0707139 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.4899 | 6.94147 | 9.8286 | 11.107 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.80978 | 13.3015 | 33.6931 | 57.3298 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.68621 | 1.20859 | 1.29092 | 1.49596 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.353554 | 0.456578 | 0.362741 | 1.23375 |
CDS Structure of MLOC_50927
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50927.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g30210.1 |
+2 |
4e-39 |
142 |
103/192 (54%) |
13108.m03126 protein 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed |
| TAIR PP10 |
AT1G06650.2 |
+2 |
3e-22 |
94 |
73/191 (38%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2035909-2037186 FORWARD LENGTH=369 |