MLOC_50917 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.275884.71783.766455.40331
LEAShoots from the seedlings (10 cm shoot stage)0.7897220.7150820.2582690.488391
INF1Young developing inflorescences (5mm)3.329764.011794.630623.9945
INF2Developing inflorescences (1-1.5 cm)3.842894.532444.123955.41596
ROORoots from the seedlings (10 cm shoot stage)3.811053.374713.497934.49099
NODDeveloping tillers at six leaf stage, 3rd internode0.3946051.587432.201964.47926
CAR5Developing grain, bracts removed (5 DPA)2.435442.882961.970822.86698
CAR15Developing grain, bracts removed (15 DPA)0.5007310.4832550.3646671.38468



CDS Structure of MLOC_50917






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_50917.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_50917.1CUST_12716_PI427708080AvailableAvailablecontig_367640 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g02050.1 +3 1e-23 91 39/54 (72%) 13105.m00158 protein mitochondrial import inner membrane translocase subunit Tim, putative
TAIR PP10None-----