MLOC_50869 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains33.04536.418538.45230.5196
LEAShoots from the seedlings (10 cm shoot stage)39.526341.00349.716431.772
INF1Young developing inflorescences (5mm)70.386679.047486.658354.6557
INF2Developing inflorescences (1-1.5 cm)60.653375.572.868363.5933
ROORoots from the seedlings (10 cm shoot stage)28.106942.203938.987639.6532
NODDeveloping tillers at six leaf stage, 3rd internode35.68132.051333.423188.5871
CAR5Developing grain, bracts removed (5 DPA)43.390644.795654.789537.8656
CAR15Developing grain, bracts removed (15 DPA)19.083317.925218.647735.6985



CDS Structure of MLOC_50869






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252715.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252715.1CUST_23559_PI427708080NoneNoneNone
MLOC_45.1NoneAvailableNonecontig_10026 (Mapped)
MLOC_47403.1NoneAvailableNonecontig_305449 (Not mapped)
MLOC_50869.1NoneAvailableAvailablecontig_367131 (Mapped)
MLOC_8594.1NoneAvailableNonecontig_14456 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----