MLOC_50863 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.930619.915419.210820.0783
LEAShoots from the seedlings (10 cm shoot stage)17.149620.95714.725615.9164
INF1Young developing inflorescences (5mm)26.781225.373724.234123.0374
INF2Developing inflorescences (1-1.5 cm)44.97629.460830.932840.8154
ROORoots from the seedlings (10 cm shoot stage)13.52718.216617.27423.8591
NODDeveloping tillers at six leaf stage, 3rd internode10.01847.227787.3994123.3003
CAR5Developing grain, bracts removed (5 DPA)15.7816.308816.112617.1573
CAR15Developing grain, bracts removed (15 DPA)7.479937.864397.2279718.9682



CDS Structure of MLOC_50863






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_50863.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_50863.2CUST_12668_PI427708083AvailableAvailablecontig_367099 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g51140.2 -2 8e-32 126 74/90 (82%) 13102.m05812 protein N-rich protein, putative, expressed
TAIR PP10 AT5G61910.2 -2 2e-14 78 48/85 (56%) DCD (Development and Cell Death) domain protein | chr5:24861091-24863729 REVERSE LENGTH=738