MLOC_5085 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.8722 | 14.4996 | 12.4136 | 11.4394 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.8664 | 14.4269 | 16.6431 | 11.5362 |
| INF1 | Young developing inflorescences (5mm) | 6.36108 | 6.9118 | 7.05744 | 4.94768 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.13434 | 6.56228 | 7.12308 | 7.02579 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.82088 | 11.0707 | 8.68667 | 10.0074 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 15.3687 | 16.5125 | 16.3516 | 46.8483 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.50591 | 8.66265 | 8.94265 | 6.90542 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.12996 | 0.79995 | 1.18183 | 2.08773 |
CDS Structure of MLOC_5085
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5085.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g48680.2 |
+1 |
2e-150 |
466 |
252/277 (91%) |
13101.m05051 protein two pore calcium channel protein 1, putative, expressed |
| TAIR PP10 |
AT4G03560.1 |
+1 |
1e-98 |
327 |
180/282 (64%) |
| Symbols: ATTPC1, TPC1, ATCCH1, FOU2 | two-pore channel 1 | chr4:1580253-1585691 FORWARD LENGTH=733 |