- Predicted Gene MLOC_50821
MLOC_50821 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 26.8628 | 22.6123 | 23.5903 | 25.8461 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.4787 | 9.03914 | 8.84035 | 10.5048 |
| INF1 | Young developing inflorescences (5mm) | 29.6205 | 28.6679 | 32.1166 | 27.187 |
| INF2 | Developing inflorescences (1-1.5 cm) | 37.3233 | 35.8864 | 42.2452 | 43.2935 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 21.8243 | 25.5371 | 29.2787 | 34.5822 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 24.5747 | 22.9724 | 17.7784 | 80.919 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 33.5933 | 34.7503 | 31.5466 | 34.6278 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 13.2545 | 10.2492 | 10.1715 | 28.4135 |
CDS Structure of MLOC_50821
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50821.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g36670.1 |
-3 |
2e-129 |
376 |
182/215 (85%) |
13109.m03619 protein peptidyl-prolyl cis-trans isomerase, putative, expressed |
| TAIR PP10 |
AT4G34960.1 |
-3 |
9e-105 |
313 |
147/216 (68%) |
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr4:16648865-16650646 FORWARD LENGTH=224 |