- Predicted Gene MLOC_50786
MLOC_50786 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_50786_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_50786_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 14.154 | 18.167 | 16.593 | 15.2567 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.5608 | 17.1691 | 18.7755 | 13.5071 |
INF1 | Young developing inflorescences (5mm) | 28.987 | 33.933 | 31.1413 | 23.4992 |
INF2 | Developing inflorescences (1-1.5 cm) | 23.742 | 23.867 | 23.7057 | 23.5028 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.1636 | 20.7402 | 15.6948 | 21.1375 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.53942 | 10.6278 | 10.3585 | 31.865 |
CAR5 | Developing grain, bracts removed (5 DPA) | 27.3378 | 26.6212 | 29.938 | 24.1591 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.7874 | 10.6277 | 10.8317 | 21.4261 |
CDS Structure of MLOC_50786
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50786.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g49270.2 |
-3 |
0.0 |
1351 |
687/774 (89%) |
13107.m09967 protein AMP deaminase, putative, expressed |
TAIR PP10 |
AT2G38280.2 |
-3 |
0.0 |
1135 |
565/766 (74%) |
| Symbols: FAC1, ATAMPD | AMP deaminase, putative / myoadenylate deaminase, putative | chr2:16033767-16038793 REVERSE LENGTH=839 |