MLOC_50724 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.154642.802162.632061.77846
LEAShoots from the seedlings (10 cm shoot stage)4.628765.144254.157663.21115
INF1Young developing inflorescences (5mm)4.332494.949136.243433.35207
INF2Developing inflorescences (1-1.5 cm)12.80028.07399.808629.42882
ROORoots from the seedlings (10 cm shoot stage)1.932223.523812.882322.86089
NODDeveloping tillers at six leaf stage, 3rd internode1.515672.29943.697886.63342
CAR5Developing grain, bracts removed (5 DPA)4.490414.082044.444443.35717
CAR15Developing grain, bracts removed (15 DPA)4.835624.331984.200278.65642



CDS Structure of MLOC_50724






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_50724.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_50724.2CUST_7199_PI427708083AvailableAvailablecontig_365228 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10 AT4G28540.1 +1 3e-11 47 29/51 (57%) | Symbols: CKL6, PAPK1 | casein kinase I-like 6 | chr4:14107284-14110511 FORWARD LENGTH=479