MLOC_5068 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.708773.890213.422393.59703
LEAShoots from the seedlings (10 cm shoot stage)3.725010.2145031.291851.48053
INF1Young developing inflorescences (5mm)12.215911.136512.70548.95254
INF2Developing inflorescences (1-1.5 cm)10.887411.419611.244610.6943
ROORoots from the seedlings (10 cm shoot stage)2.811172.553454.632542.78324
NODDeveloping tillers at six leaf stage, 3rd internode0.2740230.4712980.6324171.36468
CAR5Developing grain, bracts removed (5 DPA)1.043620.9844460.9373350.812963
CAR15Developing grain, bracts removed (15 DPA)1.144320.3163281.079571.75423



CDS Structure of MLOC_5068






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_5068.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_5068.1CUST_12663_PI427708083AvailableAvailablecontig_135829 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g65440.1 -2 3e-18 88 40/42 (95%) 13101.m07069 protein universal stress protein domain containing protein, putative, expressed
TAIR PP10 AT1G44760.1 -2 3e-15 77 35/47 (74%) Adenine nucleotide alpha hydrolases-like superfamily protein | chr1:16896894-16898427 REVERSE LENGTH=213