MLOC_50668 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.100751.865351.99471.41947
LEAShoots from the seedlings (10 cm shoot stage)1.474222.714252.668431.66074
INF1Young developing inflorescences (5mm)1.764791.876782.065091.35535
INF2Developing inflorescences (1-1.5 cm)1.533642.078842.428661.82937
ROORoots from the seedlings (10 cm shoot stage)1.401342.646482.38642.43316
NODDeveloping tillers at six leaf stage, 3rd internode1.642311.14911.528423.60716
CAR5Developing grain, bracts removed (5 DPA)1.812672.207422.183061.67117
CAR15Developing grain, bracts removed (15 DPA)0.4561930.5397610.3513150.923879



CDS Structure of MLOC_50668






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_50668.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_50668.4CUST_12662_PI427708083AvailableAvailablecontig_364260 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g52430.1 +3 2e-85 279 138/152 (91%) 13103.m05711 protein mitochondrial carrier protein, putative, expressed
TAIR PP10 AT5G66380.1 +3 2e-64 220 115/153 (75%) | Symbols: ATFOLT1, FOLT1 | folate transporter 1 | chr5:26513645-26515533 REVERSE LENGTH=308