- Predicted Gene MLOC_50668
MLOC_50668 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.10075 | 1.86535 | 1.9947 | 1.41947 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.47422 | 2.71425 | 2.66843 | 1.66074 |
INF1 | Young developing inflorescences (5mm) | 1.76479 | 1.87678 | 2.06509 | 1.35535 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.53364 | 2.07884 | 2.42866 | 1.82937 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.40134 | 2.64648 | 2.3864 | 2.43316 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.64231 | 1.1491 | 1.52842 | 3.60716 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.81267 | 2.20742 | 2.18306 | 1.67117 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.456193 | 0.539761 | 0.351315 | 0.923879 |
CDS Structure of MLOC_50668
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50668.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g52430.1 |
+3 |
2e-85 |
279 |
138/152 (91%) |
13103.m05711 protein mitochondrial carrier protein, putative, expressed |
TAIR PP10 |
AT5G66380.1 |
+3 |
2e-64 |
220 |
115/153 (75%) |
| Symbols: ATFOLT1, FOLT1 | folate transporter 1 | chr5:26513645-26515533 REVERSE LENGTH=308 |