MLOC_50618 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.33879600.2114840
LEAShoots from the seedlings (10 cm shoot stage)000.2347110
INF1Young developing inflorescences (5mm)0.1393350.2964451.014590
INF2Developing inflorescences (1-1.5 cm)0.6103180.7876051.244960
ROORoots from the seedlings (10 cm shoot stage)00.16743900
NODDeveloping tillers at six leaf stage, 3rd internode0.1244790.1317430.1309010
CAR5Developing grain, bracts removed (5 DPA)0.739470.6680960.4632340
CAR15Developing grain, bracts removed (15 DPA)0.275129000



CDS Structure of MLOC_50618






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372440
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372440CUST_25642_PI427708080NoneNoneNone
MLOC_1019.1NoneAvailableNonecontig_1085557 (Not mapped)
MLOC_24100.1NoneAvailableNonecontig_1636694 (Mapped)
MLOC_27107.2NoneAvailableNonecontig_180696 (Not mapped)
MLOC_27559.1NoneAvailableNonecontig_1843194 (Mapped)
MLOC_29015.1NoneAvailableAvailablecontig_1966601 (Mapped)
MLOC_33706.1NoneAvailableNonecontig_239659 (Mapped)
MLOC_34133.1NoneAvailableNonecontig_242538 (Mapped)
MLOC_34154.1NoneAvailableNonecontig_242618 (Not mapped)
MLOC_41166.1NoneAvailableNonecontig_2575058 (Mapped)
MLOC_41183.1NoneAvailableNonecontig_2575568 (Mapped)
MLOC_41235.1NoneAvailableNonecontig_2578728 (Mapped)
MLOC_41633.1NoneAvailableNonecontig_2598338 (Not mapped)
MLOC_47987.1NoneAvailableNonecontig_315801 (Not mapped)
MLOC_49862.1NoneAvailableNonecontig_349776 (Not mapped)
MLOC_50618.1NoneAvailableNonecontig_363201 (Not mapped)
MLOC_60770.1NoneAvailableNonecontig_44760 (Mapped)
MLOC_8482.1NoneAvailableNonecontig_143367 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----