MLOC_50577 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.007210.9934430.683960.963428
LEAShoots from the seedlings (10 cm shoot stage)1.395320.8145080.1749370.722085
INF1Young developing inflorescences (5mm)1.172071.776822.057681.35312
INF2Developing inflorescences (1-1.5 cm)1.544711.373151.628471.63429
ROORoots from the seedlings (10 cm shoot stage)0.6491221.2474602.06171
NODDeveloping tillers at six leaf stage, 3rd internode0.575180.623050.9707642.25349
CAR5Developing grain, bracts removed (5 DPA)1.113821.618361.211751.35725
CAR15Developing grain, bracts removed (15 DPA)0.1115841.04820.6616271.39648



CDS Structure of MLOC_50577






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250375.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250375.1CUST_23345_PI427708080NoneNoneNone
MLOC_28005.1NoneAvailableNonecontig_1882661 (Not mapped)
MLOC_30451.1NoneAvailableNonecontig_209834 (Not mapped)
MLOC_50577.1NoneAvailableAvailablecontig_362237 (Not mapped)
MLOC_50654.1NoneAvailableNonecontig_363874 (Not mapped)
MLOC_77576.1NoneAvailableNonecontig_76247 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----