- Predicted Gene MLOC_50567
MLOC_50567 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 101.814 | 65.0615 | 80.1691 | 75.6371 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 62.4569 | 53.9204 | 47.5866 | 46.4154 |
| INF1 | Young developing inflorescences (5mm) | 115.597 | 130.034 | 145.67 | 97.9884 |
| INF2 | Developing inflorescences (1-1.5 cm) | 114.391 | 127.734 | 144.355 | 129.348 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 101.863 | 105.724 | 149.285 | 131.214 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 75.3319 | 96.302 | 131.493 | 347.36 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 71.1819 | 80.9052 | 74.248 | 69.2754 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 37.4293 | 34.2584 | 32.8222 | 73.9069 |
CDS Structure of MLOC_50567
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50567.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g44080.1 |
+3 |
4e-65 |
209 |
123/123 (100%) |
13106.m04627 protein ubiquitin family protein, putative, expressed |
| TAIR PP10 |
AT1G31340.1 |
+3 |
1e-64 |
207 |
122/122 (100%) |
| Symbols: RUB1, NEDD8, ATRUB1 | related to ubiquitin 1 | chr1:11218076-11219417 REVERSE LENGTH=156 |