MLOC_50544 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains71.5609122.806139.8810
LEAShoots from the seedlings (10 cm shoot stage)180.749140.52682.85550
INF1Young developing inflorescences (5mm)158.546177.721239.3220
INF2Developing inflorescences (1-1.5 cm)269.072292.331278.4880
ROORoots from the seedlings (10 cm shoot stage)101.894118.43595.33660
NODDeveloping tillers at six leaf stage, 3rd internode137.17286.988269.43140
CAR5Developing grain, bracts removed (5 DPA)131.121155.52139.940
CAR15Developing grain, bracts removed (15 DPA)90.062869.548288.21230



CDS Structure of MLOC_50544






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK370864
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370864CUST_14319_PI427708083NoneNoneNone
MLOC_25848.1NoneAvailableNonecontig_1716829 (Not mapped)
MLOC_33758.1NoneAvailableAvailablecontig_2400568 (Not mapped)
MLOC_41664.1NoneAvailableNonecontig_2599819 (Not mapped)
MLOC_46355.1NoneAvailableNonecontig_28907 (Not mapped)
MLOC_50544.2NoneAvailableNonecontig_361833 (Mapped)
MLOC_59806.1NoneAvailableNonecontig_439298 (Not mapped)
MLOC_65997.1NoneAvailableNonecontig_509832 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----