MLOC_50539 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains49.969271.340470.85520
LEAShoots from the seedlings (10 cm shoot stage)50.338231.82236.0610
INF1Young developing inflorescences (5mm)84.666272.53288.33040
INF2Developing inflorescences (1-1.5 cm)44.825833.882541.51660
ROORoots from the seedlings (10 cm shoot stage)30.682327.446628.10210
NODDeveloping tillers at six leaf stage, 3rd internode12.125514.083427.58250
CAR5Developing grain, bracts removed (5 DPA)35.330826.265838.58670
CAR15Developing grain, bracts removed (15 DPA)60.925642.630839.96190



CDS Structure of MLOC_50539






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK361032
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361032CUST_20310_PI427708080NoneNoneNone
MLOC_1450.1NoneAvailableNonecontig_112770 (Mapped)
MLOC_15435.1NoneAvailableAvailablecontig_1570681 (Mapped)
MLOC_47755.1NoneAvailableNonecontig_31159 (Not mapped)
MLOC_50539.1NoneAvailableNonecontig_361705 (Not mapped)
MLOC_64550.3NoneAvailableNonecontig_48982 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----