MLOC_50473 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.170432.669230.469630.0416
LEAShoots from the seedlings (10 cm shoot stage)30.708214.377914.843418.1907
INF1Young developing inflorescences (5mm)31.020534.789234.06126.3611
INF2Developing inflorescences (1-1.5 cm)34.155334.043334.361537.6076
ROORoots from the seedlings (10 cm shoot stage)14.628127.075121.945232.0183
NODDeveloping tillers at six leaf stage, 3rd internode38.05529.290817.508999.1554
CAR5Developing grain, bracts removed (5 DPA)25.552528.050530.691128.2109
CAR15Developing grain, bracts removed (15 DPA)7.48446.952887.5785515.8252



CDS Structure of MLOC_50473






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_50473.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_50473.1CUST_12682_PI427708080AvailableAvailablecontig_360534 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g36880.1 -2 0.0 574 345/416 (83%) 13110.m03348 protein kinesin motor domain containing protein, putative, expressed
TAIR PP10 AT4G39050.1 -2 4e-97 322 225/439 (51%) Kinesin motor family protein | chr4:18193462-18200148 FORWARD LENGTH=1055