- Predicted Gene MLOC_50429
MLOC_50429 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.45473 | 1.79846 | 1.67345 | 1.70645 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.31098 | 1.05007 | 0.591396 | 0.836033 |
| INF1 | Young developing inflorescences (5mm) | 2.88032 | 2.86883 | 3.59975 | 2.57069 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.66954 | 2.84485 | 3.60485 | 3.57663 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.42196 | 1.25165 | 3.76568 | 1.81348 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.872099 | 0.185751 | 1.68623 | 1.29792 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.87145 | 1.79784 | 2.48817 | 1.94415 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.57612 | 1.40345 | 2.04794 | 4.65197 |
CDS Structure of MLOC_50429
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50429.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g29470.1 |
+1 |
1e-42 |
155 |
76/82 (93%) |
13103.m03388 protein transcription initiation factor IID, putative, expressed |
| TAIR PP10 |
AT1G54140.1 |
+1 |
1e-26 |
108 |
52/82 (63%) |
| Symbols: TAFII21, TAF9 | TATA binding protein associated factor 21kDa subunit | chr1:20214076-20214869 REVERSE LENGTH=183 |