- Predicted Gene MLOC_50389
MLOC_50389 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_50389_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_50389_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.1425 | 5.46972 | 5.66992 | 4.71652 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.83374 | 1.06484 | 1.55488 | 2.35014 |
INF1 | Young developing inflorescences (5mm) | 3.79873 | 1.6896 | 2.17212 | 2.16107 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.73124 | 1.6416 | 1.59516 | 1.80963 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.57057 | 2.94726 | 3.78282 | 3.28955 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.9752 | 2.17046 | 2.23969 | 6.08398 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.99022 | 3.19723 | 3.95953 | 3.59342 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.138738 | 0.103507 | 0.20144 | 0.334058 |
CDS Structure of MLOC_50389
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50389.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g43530.1 |
+1 |
4e-41 |
154 |
102/143 (71%) |
13105.m04585 protein CSLC7 - cellulose synthase-like family C, expressed |
TAIR PP10 |
AT4G07960.1 |
+1 |
2e-28 |
117 |
66/141 (47%) |
| Symbols: ATCSLC12, CSLC12 | Cellulose-synthase-like C12 | chr4:4802628-4805114 REVERSE LENGTH=699 |