MLOC_50329 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.7582312.21287.724499.08935
LEAShoots from the seedlings (10 cm shoot stage)15.492619.69599.6257613.1396
INF1Young developing inflorescences (5mm)21.866919.123618.057317.7158
INF2Developing inflorescences (1-1.5 cm)38.870736.345435.768143.1281
ROORoots from the seedlings (10 cm shoot stage)1.290848.414766.478939.18445
NODDeveloping tillers at six leaf stage, 3rd internode5.800323.241753.324910.8141
CAR5Developing grain, bracts removed (5 DPA)19.085518.109715.741418.4916
CAR15Developing grain, bracts removed (15 DPA)5.229923.834394.5608711.3589



CDS Structure of MLOC_50329






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_50329.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_50329.1CUST_7137_PI427708083AvailableAvailablecontig_358481 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g36640.1 -3 9e-39 145 76/113 (67%) 13101.m03710 protein disease resistance protein RPM1, putative, expressed
TAIR PP10None-----