- Predicted Gene MLOC_50291
MLOC_50291 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_50291_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_50291_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 42.8632 | 33.811 | 34.3646 | 34.8874 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 34.9966 | 48.7127 | 51.1612 | 34.7012 |
INF1 | Young developing inflorescences (5mm) | 15.8831 | 13.7948 | 11.3676 | 11.3769 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.1896 | 11.0704 | 11.5451 | 11.5353 |
ROO | Roots from the seedlings (10 cm shoot stage) | 44.3394 | 40.7919 | 31.3755 | 43.1978 |
NOD | Developing tillers at six leaf stage, 3rd internode | 19.562 | 26.4342 | 30.3641 | 76.5495 |
CAR5 | Developing grain, bracts removed (5 DPA) | 19.6929 | 23.5719 | 24.2485 | 21.3564 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.95423 | 8.22893 | 7.76436 | 18.5717 |
CDS Structure of MLOC_50291
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50291.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g38030.1 |
-2 |
1e-170 |
494 |
249/314 (79%) |
13110.m03467 protein per1-like family protein, putative, expressed |
TAIR PP10 |
AT1G16560.3 |
-2 |
3e-109 |
335 |
176/317 (56%) |
Per1-like family protein | chr1:5668945-5670343 FORWARD LENGTH=342 |