- Predicted Gene MLOC_50290
MLOC_50290 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_50290_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_50290_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 32.3514 | 19.7984 | 21.8015 | 24.6194 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 14.6416 | 5.33514 | 8.75933 | 8.09458 |
INF1 | Young developing inflorescences (5mm) | 27.9879 | 33.9094 | 33.2185 | 27.788 |
INF2 | Developing inflorescences (1-1.5 cm) | 22.6807 | 30.1868 | 27.9402 | 30.3207 |
ROO | Roots from the seedlings (10 cm shoot stage) | 23.8271 | 19.1649 | 21.4537 | 24.222 |
NOD | Developing tillers at six leaf stage, 3rd internode | 18.8024 | 20.1202 | 13.507 | 59.3208 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.6912 | 16.0363 | 15.4913 | 15.8714 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.24182 | 2.85062 | 2.95902 | 7.28423 |
CDS Structure of MLOC_50290
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50290.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g02680.2 |
+3 |
0.0 |
563 |
273/294 (93%) |
13103.m00235 protein cyclin-dependent kinase A-1, putative, expressed |
TAIR PP10 |
AT3G48750.1 |
+3 |
4e-179 |
506 |
243/290 (84%) |
| Symbols: CDKA;1, CDC2AAT, CDK2, CDC2, CDC2A, CDKA1 | cell division control 2 | chr3:18072238-18074296 FORWARD LENGTH=294 |