MLOC_50270 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains01.102690.4439380
LEAShoots from the seedlings (10 cm shoot stage)0.5152381.01312.094810
INF1Young developing inflorescences (5mm)0.91171601.865480
INF2Developing inflorescences (1-1.5 cm)0.6727770.6215410.916810
ROORoots from the seedlings (10 cm shoot stage)00.6065421.056180
NODDeveloping tillers at six leaf stage, 3rd internode01.117340.6986280
CAR5Developing grain, bracts removed (5 DPA)0.5768480.2564880.6495350
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_50270






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK355158
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355158CUST_14008_PI427708083NoneNoneNone
MLOC_29466.1NoneAvailableNonecontig_200835 (Mapped)
MLOC_31899.1NoneAvailableNonecontig_2233361 (Not mapped)
MLOC_46847.1NoneAvailableAvailablecontig_296599 (Mapped)
MLOC_49107.1NoneAvailableNonecontig_335687 (Mapped)
MLOC_49530.1NoneAvailableNonecontig_343198 (Not mapped)
MLOC_50270.1NoneAvailableNonecontig_357847 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----