MLOC_5026 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.73823 | 4.1022 | 4.34279 | 4.07013 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.22489 | 6.04987 | 6.59936 | 4.93344 |
| INF1 | Young developing inflorescences (5mm) | 7.05209 | 7.45757 | 7.97213 | 6.02942 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.4934 | 7.81427 | 7.4787 | 8.00333 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.98412 | 6.24863 | 6.95272 | 7.02361 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.95406 | 4.79774 | 7.18347 | 15.5845 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.63276 | 7.26671 | 8.08507 | 6.6447 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.78645 | 5.26206 | 4.09906 | 10.674 |
CDS Structure of MLOC_5026
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5026.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g05530.1 |
-1 |
1e-73 |
241 |
147/261 (56%) |
13106.m00538 protein RNA recognition motif containing protein, putative, expressed |
| TAIR PP10 |
AT1G76940.2 |
-1 |
2e-26 |
108 |
48/90 (53%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:28902707-28904085 REVERSE LENGTH=179 |
