MLOC_50242 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5967811.042152.17160.881158
LEAShoots from the seedlings (10 cm shoot stage)0.9770540.6530100.642541
INF1Young developing inflorescences (5mm)2.172991.243365.151661.66239
INF2Developing inflorescences (1-1.5 cm)1.859382.832821.111491.95793
ROORoots from the seedlings (10 cm shoot stage)0.6731290.3687700.600893
NODDeveloping tillers at six leaf stage, 3rd internode0.4844040.276220.3906210.831549
CAR5Developing grain, bracts removed (5 DPA)0.1762770.3109680.5892480.247918
CAR15Developing grain, bracts removed (15 DPA)0.1912560.39078300.647026



CDS Structure of MLOC_50242






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_50242.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_50242.1CUST_4657_PI427708086AvailableAvailablecontig_357340 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----