MLOC_5024 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_5024_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_5024_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 16.9024 | 12.7732 | 14.1143 | 13.3425 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 27.2706 | 54.2748 | 51.0545 | 32.961 |
INF1 | Young developing inflorescences (5mm) | 5.91522 | 6.71541 | 5.48194 | 4.75337 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.24367 | 5.38786 | 5.649 | 5.14488 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.0281 | 19.7499 | 15.1926 | 20.1158 |
NOD | Developing tillers at six leaf stage, 3rd internode | 37.0334 | 34.2484 | 28.6835 | 96.8139 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.47806 | 8.36132 | 6.71896 | 6.53619 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.86134 | 1.87523 | 1.99265 | 4.15098 |
CDS Structure of MLOC_5024
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5024.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g05520.1 |
-2 |
0.0 |
617 |
304/343 (89%) |
13106.m00537 protein OsMKK1 - putative MAPKK based on amino acid sequence homology, expressed |
TAIR PP10 |
AT4G29810.1 |
-2 |
2e-152 |
446 |
225/359 (63%) |
| Symbols: ATMKK2, MKK2, MK1 | MAP kinase kinase 2 | chr4:14593299-14595241 REVERSE LENGTH=363 |