MLOC_5021 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.293 | 21.0727 | 20.6868 | 21.4471 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 31.3721 | 6.92255 | 9.03714 | 14.4994 |
| INF1 | Young developing inflorescences (5mm) | 19.6874 | 20.4305 | 20.39 | 17.9908 |
| INF2 | Developing inflorescences (1-1.5 cm) | 22.9215 | 25.6485 | 23.0914 | 27.758 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 21.164 | 31.3079 | 25.0075 | 37.834 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.06205 | 4.79717 | 3.99212 | 15.1484 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.17097 | 10.2194 | 10.2731 | 10.2269 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.31776 | 1.37436 | 2.56946 | 4.86122 |
CDS Structure of MLOC_5021
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5021.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g25820.1 |
+3 |
0.0 |
1367 |
681/774 (88%) |
13101.m02734 protein respiratory burst oxidase, putative, expressed |
| TAIR PP10 |
AT1G09090.2 |
+3 |
0.0 |
1008 |
511/840 (61%) |
| Symbols: ATRBOHB, RBOHB | respiratory burst oxidase homolog B | chr1:2932743-2936495 FORWARD LENGTH=843 |
