- Predicted Gene MLOC_50162
MLOC_50162 FPKM values
| FPKM by Treatment | FPKM by Replicate |
| There are no FPKM-by-treatment values calculated for this gene.
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.2677 | 11.7076 | 13.5255 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 25.3544 | 4.56983 | 7.54776 | 0 |
| INF1 | Young developing inflorescences (5mm) | 5.90046 | 7.43594 | 7.19592 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.98033 | 2.9752 | 2.51252 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 94.1062 | 57.8684 | 50.0323 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1866.81 | -1 | 518.847 | 0 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.59767 | 6.09714 | 5.13543 | 0 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.76069 | 3.19905 | 8.63987 | 0 |
CDS Structure of MLOC_50162
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50162.7
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g28330.4 |
-1 |
0.0 |
1565 |
778/817 (95%) |
13103.m03307 protein sucrose synthase, putative, expressed |
| TAIR PP10 |
AT3G43190.1 |
-1 |
0.0 |
1203 |
598/808 (74%) |
| Symbols: SUS4, ATSUS4 | sucrose synthase 4 | chr3:15179204-15182577 REVERSE LENGTH=808 |