MLOC_50161 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains45.904545.671844.71420
LEAShoots from the seedlings (10 cm shoot stage)17.518812.042914.82040
INF1Young developing inflorescences (5mm)8.535878.353657.743980
INF2Developing inflorescences (1-1.5 cm)6.121694.705986.290180
ROORoots from the seedlings (10 cm shoot stage)60.29942.920451.50870
NODDeveloping tillers at six leaf stage, 3rd internode50.091138.220819.6130
CAR5Developing grain, bracts removed (5 DPA)35.365530.561928.69460
CAR15Developing grain, bracts removed (15 DPA)0.6700450.6189021.262630



CDS Structure of MLOC_50161






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248370.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248370.1CUST_18549_PI427708080NoneNoneNone
MLOC_25343.1NoneAvailableAvailablecontig_168543 (Mapped)
MLOC_49213.1NoneAvailableNonecontig_337808 (Not mapped)
MLOC_50161.1NoneAvailableNonecontig_355628 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----