MLOC_50128 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.389133.826535.404124.45749
LEAShoots from the seedlings (10 cm shoot stage)6.882993.887780.7176673.40686
INF1Young developing inflorescences (5mm)14.586810.89089.6464510.7349
INF2Developing inflorescences (1-1.5 cm)7.70888.129556.025769.26791
ROORoots from the seedlings (10 cm shoot stage)01.8482.458943.34063
NODDeveloping tillers at six leaf stage, 3rd internode1.257230.9724871.665023.74181
CAR5Developing grain, bracts removed (5 DPA)7.189834.695426.511176.48765
CAR15Developing grain, bracts removed (15 DPA)0.7068612.750030.5228043.917



CDS Structure of MLOC_50128






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_50128.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_50128.1CUST_7114_PI427708083AvailableAvailablecontig_355188 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g62040.3 -2 3e-37 126 62/64 (97%) 13101.m06632 protein ruvB-like, putative, expressed
TAIR PP10 AT5G22330.1 -2 2e-34 122 60/64 (94%) | Symbols: ATTIP49A, RIN1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:7391026-7394071 REVERSE LENGTH=458