MLOC_50096 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.39099000
LEAShoots from the seedlings (10 cm shoot stage)7.4219509.836190
INF1Young developing inflorescences (5mm)14.37819.962982.462510
INF2Developing inflorescences (1-1.5 cm)7.4958812.972712.74480
ROORoots from the seedlings (10 cm shoot stage)02.0835100
NODDeveloping tillers at six leaf stage, 3rd internode13.746217.02225.583890
CAR5Developing grain, bracts removed (5 DPA)2.36412.064312.381830
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_50096






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK371411
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371411CUST_22128_PI427708080NoneNoneNone
MLOC_26521.2NoneAvailableNonecontig_176217 (Mapped)
MLOC_41426.1NoneAvailableNonecontig_2588012 (Not mapped)
MLOC_47093.1NoneAvailableNonecontig_300552 (Not mapped)
MLOC_48623.1NoneAvailableNonecontig_326788 (Mapped)
MLOC_50096.1NoneAvailableNonecontig_354408 (Mapped)
MLOC_52843.1NoneAvailableAvailablecontig_37844 (Mapped)
MLOC_58971.1NoneAvailableNonecontig_431680 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----