- Predicted Gene MLOC_50084
MLOC_50084 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 9.1093 | 12.7134 | 13.8342 | 11.341 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.8041 | 16.6195 | 17.3921 | 12.9018 |
INF1 | Young developing inflorescences (5mm) | 19.8039 | 23.3831 | 22.8732 | 16.8091 |
INF2 | Developing inflorescences (1-1.5 cm) | 26.9712 | 25.5204 | 23.8974 | 26.0889 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.6656 | 11.4325 | 14.7179 | 14.32 |
NOD | Developing tillers at six leaf stage, 3rd internode | 11.0748 | 16.7627 | 16.4602 | 51.7618 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.63709 | 11.8373 | 9.99699 | 9.5667 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.98427 | 8.47212 | 9.65968 | 19.7807 |
CDS Structure of MLOC_50084
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50084.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g47550.1 |
-2 |
5e-41 |
148 |
88/105 (84%) |
13105.m05041 protein ANTH/ENTH domain containing protein, putative, expressed |
TAIR PP10 |
AT2G01600.1 |
-2 |
3e-33 |
125 |
74/105 (70%) |
ENTH/ANTH/VHS superfamily protein | chr2:268975-272356 FORWARD LENGTH=571 |