MLOC_50057 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5389312.878981.761690
LEAShoots from the seedlings (10 cm shoot stage)1.3049400.968920
INF1Young developing inflorescences (5mm)12.109319.483719.90350
INF2Developing inflorescences (1-1.5 cm)16.528715.001312.34130
ROORoots from the seedlings (10 cm shoot stage)00.5704672.148550
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)1.204572.30230.7465190
CAR15Developing grain, bracts removed (15 DPA)0.2615700.7455380



CDS Structure of MLOC_50057






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK357559
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357559CUST_24027_PI427708080NoneNoneNone
MLOC_37184.1NoneAvailableAvailablecontig_2547928 (Mapped)
MLOC_48311.1NoneAvailableNonecontig_32103 (Not mapped)
MLOC_50057.1NoneAvailableNonecontig_35361 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----