MLOC_50054 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains390.799410.377401.060
LEAShoots from the seedlings (10 cm shoot stage)218.3192.163982.47240
INF1Young developing inflorescences (5mm)788.959772.469833.8950
INF2Developing inflorescences (1-1.5 cm)604.148486.273567.4550
ROORoots from the seedlings (10 cm shoot stage)255.754182.09365.750
NODDeveloping tillers at six leaf stage, 3rd internode21.22339.1499247.17920
CAR5Developing grain, bracts removed (5 DPA)290.405302.97322.0250
CAR15Developing grain, bracts removed (15 DPA)149.05693.0466106.7380



CDS Structure of MLOC_50054






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366280
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366280CUST_21273_PI427708080NoneNoneNone
MLOC_34840.2NoneAvailableAvailablecontig_244746 (Mapped)
MLOC_48778.1NoneAvailableNonecontig_329433 (Not mapped)
MLOC_50054.2NoneAvailableNonecontig_353556 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----