- Predicted Gene MLOC_50050
MLOC_50050 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_50050_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_50050_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 9.24387 | 5.55361 | 6.70923 | 5.34441 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.89308 | 10.4039 | 14.84 | 7.32248 |
INF1 | Young developing inflorescences (5mm) | 5.50571 | 4.86972 | 6.49208 | 3.39328 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.3242 | 4.36749 | 4.0838 | 3.4449 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.44687 | 7.64797 | 11.3022 | 7.23601 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.11456 | 7.06866 | 13.8651 | 20.3821 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.37207 | 4.32698 | 2.86279 | 2.38007 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.44253 | 1.5782 | 0.695742 | 2.22837 |
CDS Structure of MLOC_50050
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50050.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g56480.3 |
+1 |
2e-26 |
107 |
52/60 (87%) |
13104.m05883 protein pelota, putative, expressed |
TAIR PP10 |
AT4G27650.1 |
+1 |
1e-22 |
96 |
46/60 (77%) |
| Symbols: PEL1 | Eukaryotic release factor 1 (eRF1) family protein | chr4:13803459-13807556 REVERSE LENGTH=378 |