MLOC_50049 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains32.115546.950142.014844.6236
LEAShoots from the seedlings (10 cm shoot stage)30.559723.174214.497220.4771
INF1Young developing inflorescences (5mm)1.996352.230131.23441.6245
INF2Developing inflorescences (1-1.5 cm)4.643494.961294.064655.23827
ROORoots from the seedlings (10 cm shoot stage)26.667646.167635.305956.4876
NODDeveloping tillers at six leaf stage, 3rd internode1.070271.337651.001944.74107
CAR5Developing grain, bracts removed (5 DPA)66.948258.613458.176361.5601
CAR15Developing grain, bracts removed (15 DPA)17.549718.795215.150140.7749



CDS Structure of MLOC_50049






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250175.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250175.1CUST_18805_PI427708080NoneNoneNone
MLOC_35198.1NoneAvailableNonecontig_246378 (Mapped)
MLOC_46482.1NoneAvailableNonecontig_291039 (Mapped)
MLOC_50049.2NoneAvailableAvailablecontig_353351 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----