MLOC_5002 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.08047.818338.766030
LEAShoots from the seedlings (10 cm shoot stage)6.83997.438619.692930
INF1Young developing inflorescences (5mm)11.463911.975612.37310
INF2Developing inflorescences (1-1.5 cm)9.8571210.22669.731980
ROORoots from the seedlings (10 cm shoot stage)6.849458.748065.488140
NODDeveloping tillers at six leaf stage, 3rd internode3.101153.783796.616560
CAR5Developing grain, bracts removed (5 DPA)10.46278.97078.911340
CAR15Developing grain, bracts removed (15 DPA)4.179123.292123.97910



CDS Structure of MLOC_5002






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249835.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249835.1CUST_18746_PI427708080NoneNoneNone
MLOC_10109.1NoneAvailableAvailablecontig_1558443 (Mapped)
MLOC_5002.2NoneAvailableNonecontig_135772 (Mapped)
MLOC_68672.1NoneAvailableNonecontig_55147 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----