- Predicted Gene MLOC_50008
MLOC_50008 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.557421 | 1.62605 | 1.11758 | 0.807079 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.581957 | 0.966177 | 1.7959 | 0.64304 |
| INF1 | Young developing inflorescences (5mm) | 0.444595 | 0.318924 | 0.656173 | 0.276566 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.599009 | 0.471946 | 0.693377 | 0.437934 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.179508 | 0.219623 | 0.742615 | 0.22849 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.193177 | 0.777749 | 1.20319 | 2.02916 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.30464 | 1.05688 | 0.855992 | 0.720611 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.849454 | 0.730053 | 0.710876 | 1.25926 |
CDS Structure of MLOC_50008
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50008.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g25130.1 |
+2 |
1e-25 |
102 |
48/58 (83%) |
13110.m02113 protein aminotransferase, classes I and II, domain containing protein, expressed |
| TAIR PP10 |
AT1G17290.1 |
+2 |
6e-19 |
87 |
41/58 (71%) |
| Symbols: AlaAT1 | alanine aminotransferas | chr1:5922771-5926093 FORWARD LENGTH=543 |