- Predicted Gene MLOC_50000
MLOC_50000 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 1.08023 | 0.571792 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.860204 | 0.427416 | 0.700296 | 0.475564 |
INF1 | Young developing inflorescences (5mm) | 0.886214 | 0.681615 | 0.587036 | 0.485342 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.77567 | 0.739678 | 1.46622 | 1.21293 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.437908 | 0 | 1.01501 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.421777 | 0.332169 | 0.861828 | 1.08267 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.569304 | 0.342108 | 0.218092 | 0.323397 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_50000
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_50000.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g08170.1 |
-2 |
3e-17 |
79 |
37/40 (93%) |
13107.m00806 protein ruvB-like, putative, expressed |
TAIR PP10 |
AT5G22330.1 |
-2 |
8e-16 |
74 |
36/39 (92%) |
| Symbols: ATTIP49A, RIN1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:7391026-7394071 REVERSE LENGTH=458 |