MLOC_49972 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.659515.597.519480
LEAShoots from the seedlings (10 cm shoot stage)48.033875.496944.58950
INF1Young developing inflorescences (5mm)18.76121.494520.42150
INF2Developing inflorescences (1-1.5 cm)48.998422.426532.70740
ROORoots from the seedlings (10 cm shoot stage)32.790230.748523.80910
NODDeveloping tillers at six leaf stage, 3rd internode27.126616.847125.02970
CAR5Developing grain, bracts removed (5 DPA)10.60478.522587.084280
CAR15Developing grain, bracts removed (15 DPA)2.689463.107941.589290



CDS Structure of MLOC_49972






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362128
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362128CUST_20491_PI427708080NoneNoneNone
MLOC_19687.1NoneAvailableAvailablecontig_158601 (Mapped)
MLOC_49972.1NoneAvailableNonecontig_35186 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----