- Predicted Gene MLOC_49961
MLOC_49961 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 107.466 | 139.226 | 120.765 | 234.504 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 39.9207 | 17.7352 | 16.1833 | 36.6953 |
| INF1 | Young developing inflorescences (5mm) | 33.1278 | 26.6009 | 27.8166 | 54.4034 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.0022 | 17.613 | 19.3533 | 45.1853 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 84.252 | 54.1795 | 56.9152 | 137.696 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 72.9538 | 31.9204 | 40.0398 | 185.62 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 39.9567 | 45.5778 | 41.0426 | 100.905 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.64568 | 3.80717 | 2.09613 | 16.2796 |
CDS Structure of MLOC_49961
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_49961.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g26850.3 |
+1 |
5e-13 |
65 |
31/34 (91%) |
13111.m02571 protein erythronate-4-phosphate dehydrogenase, putative, expressed |
| TAIR PP10 |
AT4G13940.1 |
+2 |
2e-25 |
66 |
32/36 (89%) |
| Symbols: HOG1, EMB1395, SAHH1, MEE58, ATSAHH1 | S-adenosyl-L-homocysteine hydrolase | chr4:8054931-8056676 FORWARD LENGTH=485 |