MLOC_49958 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3858570.4906850.4678020
LEAShoots from the seedlings (10 cm shoot stage)1.3712100.5493230
INF1Young developing inflorescences (5mm)1.936911.598392.049810
INF2Developing inflorescences (1-1.5 cm)3.033782.450952.253470
ROORoots from the seedlings (10 cm shoot stage)00.1900680.5063740
NODDeveloping tillers at six leaf stage, 3rd internode1.043512.109211.763930
CAR5Developing grain, bracts removed (5 DPA)1.836061.539931.206970
CAR15Developing grain, bracts removed (15 DPA)0.8730590.6368791.07210



CDS Structure of MLOC_49958






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK355789
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355789CUST_14021_PI427708083NoneNoneNone
MLOC_29085.1NoneAvailableNonecontig_197326 (Mapped)
MLOC_30173.1NoneAvailableNonecontig_2071003 (Mapped)
MLOC_43210.1NoneAvailableNonecontig_26860 (Not mapped)
MLOC_46956.1NoneAvailableAvailablecontig_298397 (Not mapped)
MLOC_49958.2NoneAvailableNonecontig_351545 (Not mapped)
MLOC_61923.1NoneAvailableNonecontig_460007 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----