MLOC_49880 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.829673.804364.190223.68084
LEAShoots from the seedlings (10 cm shoot stage)4.753996.726558.859895.53523
INF1Young developing inflorescences (5mm)8.100059.070879.611937.47309
INF2Developing inflorescences (1-1.5 cm)11.080211.0313.044112.1942
ROORoots from the seedlings (10 cm shoot stage)1.996532.235914.168062.85125
NODDeveloping tillers at six leaf stage, 3rd internode1.354381.699672.060514.88608
CAR5Developing grain, bracts removed (5 DPA)7.293656.666576.774726.66954
CAR15Developing grain, bracts removed (15 DPA)5.502296.00993.9400112.3627



CDS Structure of MLOC_49880






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_49880.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_49880.1CUST_7069_PI427708083AvailableAvailablecontig_350073 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g02030.1 +2 2e-17 59 29/42 (69%) 13103.m00146 protein folylpolyglutamate synthase, mitochondrial precursor, putative, expressed
TAIR PP10None-----