- Predicted Gene MLOC_49876
MLOC_49876 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0836505 | 0 | 0 | 0.0818634 |
| INF1 | Young developing inflorescences (5mm) | 0.605565 | 0.189566 | 0.384979 | 0.342122 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.5421 | 10.117 | 13.6553 | 13.5279 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0230505 | 0.0606278 | 0.141746 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 64.4977 | 80.4214 | 75.965 | 73.7602 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.11495 | 7.3871 | 7.18083 | 16.3357 |
CDS Structure of MLOC_49876
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_49876.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g32948.1 |
+3 |
2e-27 |
110 |
55/58 (95%) |
13109.m03304 protein OsMADS8 - MADS-box family gene with MIKCc type-box, expressed |
| TAIR PP10 |
AT1G24260.3 |
+3 |
1e-26 |
107 |
53/58 (91%) |
| Symbols: SEP3 | K-box region and MADS-box transcription factor family protein | chr1:8593790-8595862 REVERSE LENGTH=237 |