- Predicted Gene MLOC_49808
MLOC_49808 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.752588 | 0.634455 | 0 | 0.819502 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.80693 | 1.19714 | 0.958507 | 2.14033 |
| INF1 | Young developing inflorescences (5mm) | 0.671149 | 1.27797 | 0 | 0.800311 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.54107 | 0.915475 | 1.4071 | 1.24836 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.69922 | 1.98269 | 0 | 3.95105 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 1.62876 | 1.33975 | 8.00323 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.48662 | 2.40845 | 2.90606 | 2.38784 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.646266 | 2.00602 | 0.975329 | 2.37006 |
CDS Structure of MLOC_49808
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_49808.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g47820.2 |
-2 |
4e-19 |
82 |
48/61 (79%) |
13107.m05108 protein acyl-CoA dehydrogenase family member 10, putative, expressed |
| TAIR PP10 |
AT3G06810.1 |
-2 |
6e-15 |
69 |
38/61 (62%) |
| Symbols: IBR3 | acyl-CoA dehydrogenase-related | chr3:2146534-2150654 FORWARD LENGTH=824 |