- Predicted Gene MLOC_49802
MLOC_49802 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_49802_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_49802_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.58921 | 1.85111 | 2.36311 | 1.75882 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.34352 | 0.17286 | 0.336251 | 0.558118 |
INF1 | Young developing inflorescences (5mm) | 7.99311 | 9.30105 | 10.2739 | 6.9413 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.97319 | 10.0693 | 8.95472 | 9.42589 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.12904 | 2.39576 | 2.87175 | 2.73846 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.257606 | 0.341617 | 0.470013 | 1.17885 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.90764 | 1.88641 | 1.83904 | 1.65196 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.49185 | 1.4206 | 1.28206 | 2.92095 |
CDS Structure of MLOC_49802
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_49802.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g23250.1 |
+3 |
3e-78 |
281 |
257/837 (31%) |
13105.m02357 protein Leucine Rich Repeat family protein, expressed |
TAIR PP10 |
AT1G69550.1 |
+3 |
1e-47 |
186 |
181/625 (29%) |
disease resistance protein (TIR-NBS-LRR class) | chr1:26148836-26153374 REVERSE LENGTH=1400 |