MLOC_49769 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.927114.487311.28460
LEAShoots from the seedlings (10 cm shoot stage)5.271035.998358.919040
INF1Young developing inflorescences (5mm)10.57484.080538.402150
INF2Developing inflorescences (1-1.5 cm)9.947883.906846.110030
ROORoots from the seedlings (10 cm shoot stage)32.33510.893419.80250
NODDeveloping tillers at six leaf stage, 3rd internode7.6435218.765120.9290
CAR5Developing grain, bracts removed (5 DPA)7.433737.314658.884670
CAR15Developing grain, bracts removed (15 DPA)1.776881.3122.724910



CDS Structure of MLOC_49769






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK251112.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251112.1CUST_13574_PI427708083NoneNoneNone
MLOC_1157.1NoneAvailableNonecontig_10988 (Mapped)
MLOC_16649.1NoneAvailableNonecontig_1574075 (Mapped)
MLOC_25366.1NoneAvailableNonecontig_16873 (Not mapped)
MLOC_26501.1NoneAvailableAvailablecontig_176107 (Mapped)
MLOC_30261.1NoneAvailableNonecontig_2078155 (Not mapped)
MLOC_42453.1NoneAvailableNonecontig_2645461 (Not mapped)
MLOC_49714.1NoneAvailableNonecontig_346785 (Not mapped)
MLOC_49769.1NoneAvailableNonecontig_348054 (Not mapped)
MLOC_54307.1NoneAvailableNonecontig_390402 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----